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  5. Brara.H00188.1

Brara.H00188.1


Description : Unknown function


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00188.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g52060 No alias Jacalin-related lectin 9 [Source:UniProtKB/Swiss-Prot;Acc:F4IB95] 0.03 Orthogroups_2024-Update
At2g25980 No alias Jacalin-related lectin 20... 0.04 Orthogroups_2024-Update
At3g16440 No alias Myrosinase-binding protein-like protein-300B... 0.03 Orthogroups_2024-Update
At5g38550 No alias Jacalin-related lectin 44... 0.04 Orthogroups_2024-Update
At5g49870 No alias Jacalin-related lectin 48... 0.04 Orthogroups_2024-Update
Brara.A03063.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00213.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00189.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.02G227500 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G030210.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os10g18870 No alias dirigent, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00031601-RA No alias (at1g52100 : 101.0) Mannose-binding lectin superfamily... 0.02 Orthogroups_2024-Update
PSME_00042087-RA No alias (at1g19715 : 295.0) Mannose-binding lectin superfamily... 0.03 Orthogroups_2024-Update
Sobic.008G168800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen04g034000 No alias Jacalin-like lectin domain 0.03 Orthogroups_2024-Update
Sopen09g033370 No alias Jacalin-like lectin domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 467 599
IPR001229 Jacalin-like_lectin_dom 15 150
IPR001229 Jacalin-like_lectin_dom 168 288
IPR001229 Jacalin-like_lectin_dom 313 444
No external refs found!