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  5. Brara.H00189.1

Brara.H00189.1


Description : Unknown function


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00189.1
Cluster HCAA Clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
At1g52000 No alias Jacalin-related lectin 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU23] 0.03 Orthogroups_2024-Update
At1g52060 No alias Jacalin-related lectin 9 [Source:UniProtKB/Swiss-Prot;Acc:F4IB95] 0.03 Orthogroups_2024-Update
At5g38550 No alias Jacalin-related lectin 44... 0.03 Orthogroups_2024-Update
Brara.H00188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g25030 No alias dirigent, putative 0.02 Orthogroups_2024-Update
LOC_Os12g05020 No alias jasmonate-induced protein, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.008G168800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 248 322
IPR001229 Jacalin-like_lectin_dom 13 149
IPR001229 Jacalin-like_lectin_dom 167 218
No external refs found!