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Description : auxin efflux transporter *(PILS) & auxin transporter *(PILS)
Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.H00235.1 | |
| Cluster | HCAA Clusters: Cluster_290 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g61980 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g60730 | No alias | Auxin efflux carrier family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.B02272.1 | No alias | auxin efflux transporter *(PILS) & auxin transporter *(PILS) | 0.04 | Orthogroups_2024-Update | |
| Brara.E01632.1 | No alias | auxin efflux transporter *(PILS) & auxin transporter *(PILS) | 0.03 | Orthogroups_2024-Update | |
| Brara.G03026.1 | No alias | auxin efflux transporter *(PILS) & auxin transporter *(PILS) | 0.04 | Orthogroups_2024-Update | |
| Brara.I01029.1 | No alias | auxin efflux transporter *(PILS) & auxin transporter *(PILS) | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G157700 | No alias | Auxin efflux carrier family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.03G113600 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.09G195600 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G072900 | No alias | Auxin efflux carrier family protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os05g40330 | No alias | auxin efflux carrier component, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g09190 | No alias | auxin efflux carrier component, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_21662g0010 | No alias | (at5g65980 : 409.0) Auxin efflux carrier family protein;... | 0.04 | Orthogroups_2024-Update | |
| MA_6089g0010 | No alias | (at5g65980 : 385.0) Auxin efflux carrier family protein;... | 0.04 | Orthogroups_2024-Update | |
| PSME_00010166-RA | No alias | (at2g17500 : 377.0) Auxin efflux carrier family protein;... | 0.04 | Orthogroups_2024-Update | |
| Pp1s420_20V6 | No alias | auxin efflux carrier auxin transport protein | 0.02 | Orthogroups_2024-Update | |
| Seita.1G228300.1 | No alias | auxin transporter *(PILS) & auxin efflux transporter *(PILS) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G520000.2 | No alias | auxin efflux transporter *(PILS) & auxin transporter *(PILS) | 0.05 | Orthogroups_2024-Update | |
| Solyc02g082450 | No alias | Auxin efflux carrier family protein (AHRD V3.3 *** AT2G17500.4) | 0.02 | Orthogroups_2024-Update | |
| Solyc02g091240 | No alias | Auxin efflux carrier (AHRD V3.3 *** A0A103XKJ3_CYNCS) | 0.04 | Orthogroups_2024-Update | |
| Solyc12g095750 | No alias | Auxin efflux carrier family protein, putative (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Sopen02g027140 | No alias | Membrane transport protein | 0.05 | Orthogroups_2024-Update | |
| Sopen02g035860 | No alias | Membrane transport protein | 0.02 | Orthogroups_2024-Update | |
| Sopen12g031650 | No alias | Membrane transport protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | 16Dec |
| BP | GO:0055085 | transmembrane transport | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Predicted GO |
| BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
| BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
| BP | GO:0036260 | RNA capping | IEP | Predicted GO |
| MF | GO:0042277 | peptide binding | IEP | Predicted GO |
| BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
| BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
| MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
| BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
| BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Predicted GO |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
| MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004776 | Mem_trans | 29 | 423 |
| No external refs found! |