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  5. Brara.H00312.1

Brara.H00312.1


Description : G-class RAB GTPase


Gene families : OG_42_0001031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00312.1
Cluster HCAA Clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
At1g49300 No alias Ras-related protein RABG3e... 0.03 Orthogroups_2024-Update
Sobic.003G010400.1 No alias G-class RAB GTPase 0.02 Orthogroups_2024-Update
Sobic.003G276100.1 No alias G-class RAB GTPase 0.03 Orthogroups_2024-Update
Sopen01g051710 No alias Ras family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0042162 telomeric DNA binding IEP Predicted GO
MF GO:0043047 single-stranded telomeric DNA binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!