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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.H00318.1 | |
| Cluster | HCAA Clusters: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At2g47560 | No alias | RING-H2 finger protein ATL64... | 0.05 | Orthogroups_2024-Update | |
| Bradi5g19960 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G340444 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G409372 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G172300 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.05 | Orthogroups_2024-Update | |
| LOC_Os02g15000 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.04 | Orthogroups_2024-Update | |
| LOC_Os02g35329 | No alias | RING-H2 finger protein ATL3F, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_31462g0010 | No alias | (at1g49220 : 101.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_6697g0010 | No alias | (at1g72310 : 120.0) Encodes a putative RING-H2 zinc... | 0.02 | Orthogroups_2024-Update | |
| MA_80729g0030 | No alias | (at3g16720 : 139.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| MA_81046g0010 | No alias | (at1g49230 : 127.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_94359g0010 | No alias | (at4g35480 : 121.0) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
| Potri.007G057300 | No alias | RING-H2 finger A3A | 0.02 | Orthogroups_2024-Update | |
| Seita.2G302400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.4G288400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G038733.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G109200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.010G086400.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Sopen03g005910 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 134 | 177 |
| No external refs found! |