1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H00433.1

Brara.H00433.1


Description : HSF-type transcription factor


Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00433.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
At5g43840 No alias Heat stress transcription factor A-6a... 0.03 Orthogroups_2024-Update
Bradi1g61620 No alias heat shock transcription factor B4 0.01 Orthogroups_2024-Update
Brara.B02421.1 No alias HSF-type transcription factor 0.01 Orthogroups_2024-Update
Brara.H00586.1 No alias HSF-type transcription factor 0.01 Orthogroups_2024-Update
Glyma.01G185800 No alias heat shock factor 4 0.04 Orthogroups_2024-Update
Glyma.04G039600 No alias heat shock transcription factor B4 0.03 Orthogroups_2024-Update
Glyma.10G003100 No alias heat shock transcription factor A6B 0.02 Orthogroups_2024-Update
Glyma.14G096800 No alias heat shock transcription factor A2 0.04 Orthogroups_2024-Update
Glyma.19G137800 No alias heat shock transcription factor B3 0.03 Orthogroups_2024-Update
LOC_Os03g25120 No alias HSF-type DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10432269g0010 No alias (at5g16820 : 282.0) Encodes a putative transcription... 0.01 Orthogroups_2024-Update
MA_12808g0010 No alias (at5g16820 : 266.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
MA_41252g0020 No alias (at1g32330 : 219.0) Member of Heat Stress Transcription... 0.01 Orthogroups_2024-Update
Potri.002G124800 No alias heat shock transcription factor B4 0.02 Orthogroups_2024-Update
Potri.015G141100 No alias heat shock transcription factor B2A 0.02 Orthogroups_2024-Update
Seita.4G237900.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc04g016000 No alias SolycHsfB3a 0.02 Orthogroups_2024-Update
Solyc09g082670 No alias SolycHsfA6a 0.02 Orthogroups_2024-Update
Solyc11g064990 No alias SolycHsfB4b 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 35 124
No external refs found!