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  5. Brara.H00451.1

Brara.H00451.1


Description : Unknown function


Gene families : OG_42_0004466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00451.1
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Bradi2g09607 No alias TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0.02 Orthogroups_2024-Update
LOC_Os01g15770 No alias transmembrane protein 136, putative, expressed 0.04 Orthogroups_2024-Update
Potri.005G231600 No alias TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006634 TLC-dom 36 213
No external refs found!