Brara.H00504.1

Description : splicing factor *(CFM6/7)

Gene families : OG_42_0001255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H00504.1
Cluster	HCAA Clusters: Cluster_288

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi1g42940	No alias	RNA-binding CRS1 / YhbY (CRM) domain protein	0.03	Orthogroups_2024-Update
Seita.4G132500.1	No alias	splicing factor *(CFM6/7)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
CC	GO:0005839	proteasome core complex	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	170	255

External Links

No external refs found!