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  5. Brara.H00586.1

Brara.H00586.1


Description : HSF-type transcription factor


Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00586.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
At3g51910 No alias Heat stress transcription factor A-7a... 0.03 Orthogroups_2024-Update
Bradi2g49860 No alias winged-helix DNA-binding transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.G00630.1 No alias HSF-type transcription factor 0.04 Orthogroups_2024-Update
Brara.H00433.1 No alias HSF-type transcription factor 0.01 Orthogroups_2024-Update
MA_12808g0010 No alias (at5g16820 : 266.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
Sobic.004G101400.1 No alias HSF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g006000 No alias SolycHsfA4a 0.02 Orthogroups_2024-Update
Solyc08g076590 No alias SolycHsfA1c 0.03 Orthogroups_2024-Update
Sopen03g002000 No alias HSF-type DNA-binding 0.03 Orthogroups_2024-Update
Sopen04g032370 No alias HSF-type DNA-binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0019781 NEDD8 activating enzyme activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!