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  5. Brara.H00622.1

Brara.H00622.1


Description : plasma membrane-to-nucleus signalling factor *(BRX)


Gene families : OG_42_0000856 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00622.1
Cluster HCAA Clusters: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
At2g21030 No alias CONTAINS InterPro DOMAIN/s: Disease resistance/zinc... 0.03 Orthogroups_2024-Update
GRMZM2G108996 No alias DZC (Disease resistance/zinc finger/chromosome... 0.03 Orthogroups_2024-Update
PSME_00040202-RA No alias (at1g54180 : 268.0) Belongs to five-member BRX gene... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
InterPro domains Description Start Stop
IPR027988 BRX_N 22 54
IPR013591 Brevis_radix_dom 282 336
IPR013591 Brevis_radix_dom 134 188
No external refs found!