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  5. Brara.H00652.1

Brara.H00652.1


Description : component *(PsbX) of PS-II complex


Gene families : OG_42_0003584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00652.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_00335 No alias hypothetical protein 0.06 Orthogroups_2024-Update
A4A49_04481 No alias hypothetical protein 0.08 Orthogroups_2024-Update
A4A49_65027 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Brara.G00467.1 No alias component *(PsbX) of PS-II complex 0.05 Orthogroups_2024-Update
Glyma.04G055300 No alias photosystem II subunit X 0.03 Orthogroups_2024-Update
Glyma.06G055500 No alias photosystem II subunit X 0.08 Orthogroups_2024-Update
Glyma.09G067700 No alias photosystem II subunit X 0.04 Orthogroups_2024-Update
Glyma.09G073900 No alias photosystem II subunit X 0.05 Orthogroups_2024-Update
Glyma.15G174200 No alias photosystem II subunit X 0.04 Orthogroups_2024-Update
HORVU2Hr1G019270.2 No alias component *(PsbX) of PS-II complex 0.03 Orthogroups_2024-Update
HORVU3Hr1G105780.1 No alias component *(PsbX) of PS-II complex 0.03 Orthogroups_2024-Update
MA_59693g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.006G222300 No alias photosystem II subunit X 0.03 Orthogroups_2024-Update
Potri.018G065200 No alias photosystem II subunit X 0.03 Orthogroups_2024-Update
Pp1s116_110V6 No alias ultraviolet-b-repressible protein 0.07 Orthogroups_2024-Update
Pp1s249_53V6 No alias ultraviolet-b-repressible protein 0.06 Orthogroups_2024-Update
Pp1s307_12V6 No alias ultraviolet-b-repressible protein 0.08 Orthogroups_2024-Update
Seita.2G429000.1 No alias component *(PsbX) of PS-II complex 0.06 Orthogroups_2024-Update
Sobic.002G414400.1 No alias component *(PsbX) of PS-II complex 0.07 Orthogroups_2024-Update
Sobic.003G055300.1 No alias component *(PsbX) of PS-II complex 0.04 Orthogroups_2024-Update
Solyc05g025600 No alias LOW QUALITY:Photosystem II subunit X (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen05g020200 No alias Photosystem II reaction centre X protein (PsbX) 0.05 Orthogroups_2024-Update
Sopen12g004000 No alias Photosystem II reaction centre X protein (PsbX) 0.03 Orthogroups_2024-Update
Sopen12g004010 No alias Photosystem II reaction centre X protein (PsbX) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA 16Dec
BP GO:0015979 photosynthesis IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 89 125
No external refs found!