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  5. Brara.H00783.1

Brara.H00783.1


Description : Unknown function


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00783.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Bradi2g19470 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Brara.A02033.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01558.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G472226 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Glyma.06G057500 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Glyma.15G019000 No alias Protein of unknown function (DUF1677) 0.04 Orthogroups_2024-Update
Potri.001G188700 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Seita.1G027600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G387000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G094700.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 3 87
No external refs found!