Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.H00836.1 | |
Cluster | HCAA Clusters: Cluster_261 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D02177.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Brara.E00161.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.H01648.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
GRMZM2G021796 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G171277 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.11G242800 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.13G042300 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
LOC_Os01g11520 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g57410 | No alias | RING-H2 finger protein ATL5D, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g40020 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os09g38110 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_19072g0010 | No alias | (at5g17600 : 137.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
MA_6931619g0010 | No alias | (at1g49230 : 106.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
PSME_00010570-RA | No alias | (at4g10150 : 105.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00057213-RA | No alias | (at1g72310 : 115.0) Encodes a putative RING-H2 zinc... | 0.03 | Orthogroups_2024-Update | |
Potri.007G064400 | No alias | RING-H2 finger A3A | 0.03 | Orthogroups_2024-Update | |
Potri.011G063100 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.1G252600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.2G237900.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.2G238400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G005000.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.004G181300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.008G030200.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.010G157500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0015858 | nucleoside transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 116 | 159 |
No external refs found! |