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  5. Brara.H00867.1

Brara.H00867.1


Description : autophagosome ubiquitin-fold protein *(ATG8)


Gene families : OG_42_0000932 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00867.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bradi5g22295 No alias Ubiquitin-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B02658.1 No alias autophagosome ubiquitin-fold protein *(ATG8) 0.03 Orthogroups_2024-Update
GRMZM2G076826 No alias Ubiquitin-like superfamily protein 0.02 Orthogroups_2024-Update
Solyc02g080590 No alias Autophagy-related protein (AHRD V3.3 *** A0A0V0GZQ3_SOLCH) 0.03 Orthogroups_2024-Update
Solyc10g006270 No alias Autophagy-related protein (AHRD V3.3 *** K4CXF8_SOLLC) 0.04 Orthogroups_2024-Update
Sopen03g005510 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update
Sopen08g027280 No alias Autophagy protein Atg8 ubiquitin like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!