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  5. Brara.H00875.1

Brara.H00875.1


Description : component *(eL15) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00875.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
270259 No alias Ribosomal protein L23/L15e family protein 0.16 Orthogroups_2024-Update
A4A49_58101 No alias 60s ribosomal protein l15-1 0.13 Orthogroups_2024-Update
At4g16720 No alias Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1] 0.08 Orthogroups_2024-Update
Bradi1g27332 No alias Ribosomal protein L23/L15e family protein 0.26 Orthogroups_2024-Update
Bradi3g23072 No alias Ribosomal protein L23/L15e family protein 0.15 Orthogroups_2024-Update
Brara.C04547.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
Cre02.g091100 No alias Ribosomal protein L23/L15e family protein 0.21 Orthogroups_2024-Update
GRMZM2G024354 No alias Ribosomal protein L23/L15e family protein 0.07 Orthogroups_2024-Update
Glyma.01G207700 No alias Ribosomal protein L23/L15e family protein 0.15 Orthogroups_2024-Update
Glyma.05G061400 No alias Ribosomal protein L23/L15e family protein 0.18 Orthogroups_2024-Update
Glyma.11G034700 No alias Ribosomal protein L23/L15e family protein 0.13 Orthogroups_2024-Update
Glyma.17G143200 No alias Ribosomal protein L23/L15e family protein 0.18 Orthogroups_2024-Update
HORVU2Hr1G052650.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
HORVU5Hr1G048830.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Kfl00064_0230 kfl00064_0230_v1.1 (at4g16720 : 296.0) Ribosomal protein L23/L15e family... 0.08 Orthogroups_2024-Update
LOC_Os03g40180 No alias 60S ribosomal protein L15, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os05g19370 No alias 60S ribosomal protein L15, putative, expressed 0.03 Orthogroups_2024-Update
MA_19619g0010 No alias (o82528|rl15_pethy : 332.0) 60S ribosomal protein L15 -... 0.13 Orthogroups_2024-Update
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.19 Orthogroups_2024-Update
Potri.003G078700 No alias Ribosomal protein L23/L15e family protein 0.11 Orthogroups_2024-Update
Pp1s134_151V6 No alias FCAALL.416; 60S ribosomal protein L15 (RPL15A)... 0.17 Orthogroups_2024-Update
Pp1s152_141V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.19 Orthogroups_2024-Update
Pp1s28_15V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.06 Orthogroups_2024-Update
Pp1s34_445V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.09 Orthogroups_2024-Update
Pp1s7_364V6 No alias FCAALL.416; 60S ribosomal protein L15 (RPL15A)... 0.1 Orthogroups_2024-Update
Seita.2G046800.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.25 Orthogroups_2024-Update
Seita.2G317300.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Sobic.002G047600.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Sobic.002G304900.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.28 Orthogroups_2024-Update
Solyc04g008460 No alias SET-domain containing protein lysine methyltransferase... 0.27 Orthogroups_2024-Update
Solyc06g060400 No alias Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC) 0.28 Orthogroups_2024-Update
Solyc06g064630 No alias Ribosomal protein L15 (AHRD V3.3 *** K4C793_SOLLC) 0.09 Orthogroups_2024-Update
Sopen04g003610 No alias Ribosomal L15 0.19 Orthogroups_2024-Update
Sopen06g020540 No alias Ribosomal L15 0.18 Orthogroups_2024-Update
Sopen06g023110 No alias Ribosomal L15 0.36 Orthogroups_2024-Update
evm.model.contig_2025.57 No alias (at4g16720 : 267.0) Ribosomal protein L23/L15e family... 0.31 Orthogroups_2024-Update
evm.model.tig00000310.75 No alias (at4g16720 : 256.0) Ribosomal protein L23/L15e family... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!