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  5. Brara.H00935.1

Brara.H00935.1


Description : component *(bL19c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0002220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002220_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.H00935.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Bradi3g50390 No alias Ribosomal protein L19 family protein 0.08 Orthogroups_2024-Update
Cre17.g734450 No alias Ribosomal protein L19 family protein 0.12 Orthogroups_2024-Update
Glyma.01G205400 No alias Ribosomal protein L19 family protein 0.06 Orthogroups_2024-Update
Glyma.11G037500 No alias Ribosomal protein L19 family protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G062040.3 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.13 Orthogroups_2024-Update
MA_947876g0010 No alias (at4g17560 : 107.0) Ribosomal protein L19 family... 0.05 Orthogroups_2024-Update
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.04 Orthogroups_2024-Update
Potri.001G152200 No alias Ribosomal protein L19 family protein 0.06 Orthogroups_2024-Update
Potri.012G086800 No alias Ribosomal protein L19 family protein 0.02 Orthogroups_2024-Update
Pp1s44_176V6 No alias 50s ribosomal protein 0.04 Orthogroups_2024-Update
Seita.1G256000.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Sobic.004G298100.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Solyc08g078010 No alias Ribosomal protein L19 family protein (AHRD V3.3 *** AT4G17560.1) 0.11 Orthogroups_2024-Update
Sopen08g026520 No alias Ribosomal protein L19 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042586 peptide deformylase activity IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 115 210
No external refs found!