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  5. Brara.H00953.1

Brara.H00953.1


Description : A-class RAB GTPase


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00953.1
Cluster HCAA Clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
A4A49_29337 No alias ras-related protein raba3 0.02 Orthogroups_2024-Update
Bradi2g46060 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
Brara.A03162.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
Brara.I02933.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
Glyma.01G080300 No alias RAB GTPase homolog A4D 0.02 Orthogroups_2024-Update
Glyma.03G259200 No alias RAB GTPase homolog A3 0.03 Orthogroups_2024-Update
Glyma.12G207900 No alias RAB GTPase homolog A1F 0.03 Orthogroups_2024-Update
LOC_Os01g54590 No alias ras-related protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g44070 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g50060 No alias ras-related protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp3g12050.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Potri.011G061300 No alias RAB GTPase homolog A1F 0.03 Orthogroups_2024-Update
Potri.011G070300 No alias RAB GTPase homolog A1C 0.03 Orthogroups_2024-Update
Potri.014G102200 No alias RAB GTPase homolog A3 0.02 Orthogroups_2024-Update
Sopen04g006290 No alias Ras family 0.02 Orthogroups_2024-Update
Sopen05g031410 No alias Ras family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA 16Dec
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 175
No external refs found!