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  5. Brara.H00998.1

Brara.H00998.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H00998.1
Cluster HCAA Clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
271662 No alias phloem protein 2-A15 0.02 Orthogroups_2024-Update
Bradi3g15160 No alias phloem protein 2-B1 0.03 Orthogroups_2024-Update
Bradi3g54987 No alias phloem protein 2-B12 0.03 Orthogroups_2024-Update
LOC_Os02g56840 No alias OsFBX70 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_227118g0010 No alias (at2g02340 : 82.4) phloem protein 2-B8 (PP2-B8);... 0.03 Orthogroups_2024-Update
MA_46325g0010 No alias (at2g02240 : 199.0) maternal effect embryo arrest 66... 0.03 Orthogroups_2024-Update
Mp4g13890.1 No alias Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.001G050100 No alias phloem protein 2-B1 0.03 Orthogroups_2024-Update
Seita.9G231200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc05g055870 No alias F-box protein family (AHRD V3.3 *** A0A151U5P0_CAJCA) 0.04 Orthogroups_2024-Update
Solyc12g096890 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 71 222
No external refs found!