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  5. Brara.H01014.1

Brara.H01014.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01014.1
Cluster HCAA Clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_13020 No alias pectin acetylesterase 9 0.02 Orthogroups_2024-Update
At1g09550 No alias Pectin acetylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:F4I107] 0.02 Orthogroups_2024-Update
At3g09410 No alias Pectin acetylesterase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR22] 0.07 Orthogroups_2024-Update
Brara.I00497.1 No alias pectin acetylesterase *(PAE) 0.05 Orthogroups_2024-Update
HORVU1Hr1G005140.32 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
HORVU3Hr1G116480.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
HORVU5Hr1G114530.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
LOC_Os07g44070 No alias pectinacetylesterase domain containing protein, expressed 0.04 Orthogroups_2024-Update
PSME_00022432-RA No alias (at4g19420 : 277.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
Seita.5G080600.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Seita.5G153500.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update
Seita.5G153700.1 No alias pectin acetylesterase *(PAE) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 19 370
No external refs found!