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  5. Brara.H01021.1

Brara.H01021.1


Description : carotenoid cleavage dioxygenase *(CCD4) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01021.1
Cluster HCAA Clusters: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
A4A49_16982 No alias 9-cis-epoxycarotenoid dioxygenase nced1, chloroplastic 0.03 Orthogroups_2024-Update
At3g24220 No alias 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic... 0.03 Orthogroups_2024-Update
At4g19170 No alias Probable carotenoid cleavage dioxygenase 4,... 0.03 Orthogroups_2024-Update
Bradi4g00330 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
Bradi4g00335 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
Brara.A00958.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.B02322.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.D00005.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.03 Orthogroups_2024-Update
Brara.I04483.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.04 Orthogroups_2024-Update
HORVU5Hr1G008050.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Kfl00119_0040 kfl00119_0040_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os12g42280 No alias 9-cis-epoxycarotenoid dioxygenase 1, chloroplast... 0.03 Orthogroups_2024-Update
LOC_Os12g44310 No alias carotenoid cleavage dioxygenase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428505g0020 No alias (at3g14440 : 626.0) Encodes ... 0.03 Orthogroups_2024-Update
Mp7g12990.1 No alias carotenoid cleavage dioxygenase (CCD1) 0.02 Orthogroups_2024-Update
PSME_00053495-RA No alias (at3g14440 : 677.0) Encodes ... 0.06 Orthogroups_2024-Update
Pp1s118_231V6 No alias MAA21.150; 9-cis-epoxycarotenoid dioxygenase /... 0.02 Orthogroups_2024-Update
Sobic.001G155300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.001G509200.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
Sobic.002G037400.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.004G268500.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.04 Orthogroups_2024-Update
evm.model.tig00001208.11 No alias (at3g63520 : 206.0) Encodes a protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 113 586
No external refs found!