1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H01103.1

Brara.H01103.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01103.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Brara.H01892.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Glyma.19G025900 No alias hypothetical protein 1 0.02 Orthogroups_2024-Update
MA_78696g0010 No alias (at1g30360 : 669.0) early-responsive to dehydration 4... 0.02 Orthogroups_2024-Update
Seita.5G189900.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Sopen09g026510 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 201 363
IPR032880 Csc1_N 7 180
IPR003864 RSN1_7TM 374 646
No external refs found!