Brara.H01150.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H01150.1
Cluster	HCAA Clusters: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27487	No alias	putative wrky transcription factor 23	0.03	Orthogroups_2024-Update
At1g80840	No alias	Probable WRKY transcription factor 40...	0.03	Orthogroups_2024-Update
At2g40750	No alias	Probable WRKY transcription factor 54...	0.03	Orthogroups_2024-Update
At5g56270	No alias	Probable WRKY transcription factor 2...	0.03	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi2g15877	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Bradi3g09810	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Bradi4g45290	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
Brara.A00597.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.I00057.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM5G812272	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
Glyma.02G112100	No alias	WRKY DNA-binding protein 3	0.02	Orthogroups_2024-Update
Glyma.05G029000	No alias	WRKY DNA-binding protein 72	0.03	Orthogroups_2024-Update
Glyma.05G123000	No alias	WRKY DNA-binding protein 9	0.04	Orthogroups_2024-Update
Glyma.06G061900	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Glyma.17G097900	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.18G056600	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.19G094100	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
LOC_Os01g53260	No alias	WRKY23, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49210	No alias	WRKY43, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49620	No alias	WRKY19, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g29660	No alias	WRKY69, expressed	0.03	Orthogroups_2024-Update
PSME_00051522-RA	No alias	(at2g34830 : 207.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Sobic.005G013600.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc12g011200	No alias	WRKY transcription factor 28	0.03	Orthogroups_2024-Update
Sopen01g039380	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen05g034160	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen07g026940	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update
Sopen08g004130	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006334	nucleosome assembly	IEP	Predicted GO
BP	GO:0006396	RNA processing	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
BP	GO:0034728	nucleosome organization	IEP	Predicted GO
MF	GO:0042802	identical protein binding	IEP	Predicted GO
MF	GO:0042803	protein homodimerization activity	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
BP	GO:0065004	protein-DNA complex assembly	IEP	Predicted GO
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	141	198

External Links

No external refs found!

Brara.H01150.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation