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  5. Brara.H01164.1

Brara.H01164.1


Description : Unknown function


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01164.1
Cluster HCAA Clusters: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
Bradi1g41790 No alias homolog of anti-oxidant 1 0.02 Orthogroups_2024-Update
Bradi3g35490 No alias Chloroplast-targeted copper chaperone protein 0.02 Orthogroups_2024-Update
Bradi4g28920 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G208400 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
MA_525649g0010 No alias (at2g28660 : 99.8) Chloroplast-targeted copper chaperone... 0.03 Orthogroups_2024-Update
MA_93348g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00029960-RA No alias (at4g39700 : 182.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
PSME_00051554-RA No alias (at2g28660 : 105.0) Chloroplast-targeted copper... 0.03 Orthogroups_2024-Update
Seita.5G138300.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 31 86
No external refs found!