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  5. Brara.H01243.1

Brara.H01243.1


Description : component *(uS14) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.H01243.1
Cluster HCAA Clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
171412 No alias Ribosomal protein S14p/S29e family protein 0.04 Orthogroups_2024-Update
Brara.K00623.1 No alias component *(uS14) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre08.g358556 No alias Ribosomal protein S14p/S29e family protein 0.03 Orthogroups_2024-Update
LOC_Os11g41610 No alias 40S ribosomal protein S29, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436379g0010 No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.03 Orthogroups_2024-Update
PSME_00033957-RA No alias (at4g33865 : 112.0) Ribosomal protein S14p/S29e family... 0.06 Orthogroups_2024-Update
PSME_00037160-RA No alias (at4g33865 : 113.0) Ribosomal protein S14p/S29e family... 0.04 Orthogroups_2024-Update
Potri.009G090000 No alias Ribosomal protein S14p/S29e family protein 0.05 Orthogroups_2024-Update
Pp1s58_94V6 No alias 40s ribosomal protein s29 0.04 Orthogroups_2024-Update
Pp1s79_7V6 No alias 40s ribosomal protein s29 0.02 Orthogroups_2024-Update
Pp1s7_453V6 No alias 40s ribosomal protein s29 0.04 Orthogroups_2024-Update
Solyc06g073430 No alias Ribosomal protein S3 (AHRD V3.3 --* A0A0K1ZDA3_9SOLA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 56
No external refs found!