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  5. Brara.H01286.1

Brara.H01286.1


Description : clade E phosphatase


Gene families : OG_42_0000218 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01286.1
Cluster HCAA Clusters: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
A4A49_06586 No alias putative protein phosphatase 2c 34 0.04 Orthogroups_2024-Update
At5g27930 No alias Probable protein phosphatase 2C 73... 0.03 Orthogroups_2024-Update
Glyma.06G050900 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
MA_170031g0010 No alias (at1g16220 : 158.0) Protein phosphatase 2C family... 0.02 Orthogroups_2024-Update
Pp1s65_7V6 No alias protein phosphatase- 0.02 Orthogroups_2024-Update
Pp1s69_227V6 No alias protein phosphatase- 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 68 292
No external refs found!