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  5. Brara.H01294.1

Brara.H01294.1


Description : ubiquitin adaptor protein *(TOL)


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01294.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_08573 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g22420 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
GRMZM2G023105 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
GRMZM2G062953 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
Glyma.08G004900 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G077230.1 No alias ubiquitin adaptor protein *(TOL) 0.04 Orthogroups_2024-Update
LOC_Os02g17350 No alias VHS and GAT domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os06g22650 No alias VHS and GAT domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.1G121600.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Sobic.003G008500.1 No alias ubiquitin adaptor protein *(TOL) 0.04 Orthogroups_2024-Update
Sobic.010G147100.2 No alias ubiquitin adaptor protein *(TOL) 0.02 Orthogroups_2024-Update
Solyc08g068370 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** A0A061GKP2_THECC) 0.03 Orthogroups_2024-Update
Solyc11g005460 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** AT5G63640.2) 0.03 Orthogroups_2024-Update
Sopen11g001470 No alias VHS domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA 16Dec
MF GO:0043130 ubiquitin binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR002014 VHS_dom 3 115
IPR004152 GAT_dom 195 268
No external refs found!