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  5. Brara.H01337.1

Brara.H01337.1


Description : REM-type transcription factor


Gene families : OG_42_0001059 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01337.1
Cluster HCAA Clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Sopen08g002170 No alias B3 DNA binding domain 0.03 Orthogroups_2024-Update
Sopen08g002210 No alias B3 DNA binding domain 0.03 Orthogroups_2024-Update
Sopen08g002220 No alias B3 DNA binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 156 250
IPR003340 B3_DNA-bd 25 95
IPR003340 B3_DNA-bd 288 385
No external refs found!