1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H01358.1

Brara.H01358.1


Description : beta-type-1 component *(PBA) of 26S proteasome


Gene families : OG_42_0003705 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003705_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01358.1
Cluster HCAA Clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
A4A49_15043 No alias proteasome subunit beta type-6 0.03 Orthogroups_2024-Update
Bradi1g51300 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 Orthogroups_2024-Update
Cre12.g531100 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 Orthogroups_2024-Update
HORVU7Hr1G018660.1 No alias beta-type-1 component *(PBA) of 26S proteasome 0.02 Orthogroups_2024-Update
Solyc07g016200 No alias Proteasome subunit beta type (AHRD V3.3 *** K4CCD7_SOLLC) 0.04 Orthogroups_2024-Update
evm.model.contig_4442.11 No alias (at4g31300 : 219.0) Encodes 20S proteasome subunit PBA1... 0.02 Orthogroups_2024-Update
evm.model.tig00001098.5 No alias (at4g31300 : 209.0) Encodes 20S proteasome subunit PBA1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA 16Dec
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 11 191
No external refs found!