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  5. Brara.H01451.1

Brara.H01451.1


Description : metabolite transporter *(DTX)


Gene families : OG_42_0000378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H01451.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_08271 No alias protein detoxification 55 0.03 Orthogroups_2024-Update
Bradi5g18830 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Brara.A01316.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Brara.C01451.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Brara.C04649.1 No alias metabolite transporter *(DTX) 0.04 Orthogroups_2024-Update
Glyma.16G157300 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G025760.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
HORVU6Hr1G065390.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
LOC_Os10g37920 No alias MATE efflux family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g36660 No alias MATE domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00054354-RA No alias (at1g58340 : 539.0) ZF14; FUNCTIONS IN: antiporter... 0.03 Orthogroups_2024-Update
Potri.019G086100 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
Sobic.004G283500.1 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Sopen03g005110 No alias MatE 0.02 Orthogroups_2024-Update
Sopen04g030610 No alias MatE 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
MF GO:0042910 xenobiotic transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 290 451
IPR002528 MATE_fam 69 227
No external refs found!