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  5. Brara.H01471.1

Brara.H01471.1


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity


Gene families : OG_42_0004521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004521_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.H01471.1
Cluster HCAA Clusters: Cluster_326

Target Alias Description ECC score Gene Family Method Actions
404435 No alias Thioredoxin superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G367000.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.02 Orthogroups_2024-Update
Sobic.003G342700.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 Orthogroups_2024-Update
Sobic.009G138900.1 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.03 Orthogroups_2024-Update
Sopen04g027370 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000120 RNA polymerase I transcription factor complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006360 transcription by RNA polymerase I IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!