Brara.H01709.1

Description : effector receptor *(NLR)

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H01709.1
Cluster	HCAA Clusters: Cluster_315

Target	Alias	Description	ECC score	Gene Family Method
At5g41740	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.05	Orthogroups_2024-Update
At5g46470	No alias	Disease resistance protein RPS6...	0.03	Orthogroups_2024-Update
Brara.C04586.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.I03176.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.K01524.1	No alias	effector receptor *(NLR)	0.05	Orthogroups_2024-Update
Glyma.01G046900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.06G259150	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.16G085700	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Glyma.16G086700	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Glyma.16G215400	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Glyma.19G054900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
MA_10427996g0010	No alias	(at5g36930 : 166.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
MA_10436643g0020	No alias	(at1g69550 : 493.0) disease resistance protein...	0.03	Orthogroups_2024-Update
MA_23376g0010	No alias	(at5g17680 : 157.0) disease resistance protein...	0.02	Orthogroups_2024-Update
MA_26170g0010	No alias	(at5g36930 : 147.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
MA_894630g0010	No alias	(at5g36930 : 230.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
PSME_00018710-RA	No alias	(at1g69550 : 113.0) disease resistance protein...	0.03	Orthogroups_2024-Update
Potri.T002600	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.T004501	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Potri.T047500	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	Orthogroups_2024-Update
Pp1s145_93V6	No alias	leucine-rich repeat-containing	0.02	Orthogroups_2024-Update
Pp1s223_83V6	No alias	tmv resistance protein	0.02	Orthogroups_2024-Update
Solyc04g007320	No alias	Disease resistance protein (TIR-NBS-LRR class), putative...	0.02	Orthogroups_2024-Update
Solyc06g065150	No alias	Disease resistance protein N-like protein (AHRD V3.3 ***...	0.06	Orthogroups_2024-Update
Solyc11g011080	No alias	disease resistance protein (TIR-NBS-LRR class) (AHRD...	0.03	Orthogroups_2024-Update
Sopen02g010920	No alias	NB-ARC domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0016759	cellulose synthase activity	IEP	Predicted GO
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
BP	GO:0030243	cellulose metabolic process	IEP	Predicted GO
BP	GO:0030244	cellulose biosynthetic process	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	57	198
IPR011713	Leu-rich_rpt_3	616	635
IPR002182	NB-ARC	223	444

External Links

No external refs found!

Brara.H01709.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation