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  5. Brara.H01745.1

Brara.H01745.1


Description : serine hydroxymethyltransferase & EC_2.1 transferase transferring one-carbon group & serine hydroxymethyltransferase *(SHM)


Gene families : OG_42_0000626 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.H01745.1
Cluster HCAA Clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
270566 No alias serine transhydroxymethyltransferase 1 0.02 Orthogroups_2024-Update
PSME_00015002-RA No alias (p49358|glyn_flapr : 512.0) Serine... 0.03 Orthogroups_2024-Update
Pp1s21_270V6 No alias glycine hydroxymethyltransferase 0.02 Orthogroups_2024-Update
Sobic.001G097100.3 No alias serine hydroxymethyltransferase *(SHM) & serine... 0.02 Orthogroups_2024-Update
Solyc02g091560 No alias Serine hydroxymethyltransferase (AHRD V3.3 *** A0A0R4J3Y9_SOYBN) 0.04 Orthogroups_2024-Update
Sopen02g036190 No alias Serine hydroxymethyltransferase 0.03 Orthogroups_2024-Update
evm.model.contig_2050.3 No alias (at5g26780 : 637.0) Encodes a protein with serine... 0.02 Orthogroups_2024-Update
evm.model.tig00001130.31 No alias (at4g13930 : 555.0) Encodes a serine... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 55 368
No external refs found!