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  5. Brara.H01888.1

Brara.H01888.1


Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.H01888.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61714 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Brara.G01248.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Brara.I03328.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Glyma.04G060800 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.13G368300 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
LOC_Os01g57230 No alias BTBN1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
PSME_00001436-RA No alias (at1g03010 : 601.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
Potri.006G264300 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.007G033900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.014G133500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s214_65V6 No alias root phototropism 0.02 Orthogroups_2024-Update
Pp1s96_183V6 No alias protein binding 0.02 Orthogroups_2024-Update
Seita.6G074900.1 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 Orthogroups_2024-Update
Solyc01g105680 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc08g006870 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc10g047530 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g034770 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen10g020860 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006606 protein import into nucleus IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0034504 protein localization to nucleus IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0051170 import into nucleus IEP Predicted GO
MF GO:0061608 nuclear import signal receptor activity IEP Predicted GO
CC GO:0061617 MICOS complex IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 215 485
IPR000210 BTB/POZ_dom 27 118
No external refs found!