Brara.H01965.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H01965.1
Cluster	HCAA Clusters: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33562	No alias	dof zinc finger protein dof4.6	0.04	Orthogroups_2024-Update
GRMZM2G589696	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.03G258800	No alias	Dof-type zinc finger DNA-binding family protein	0.01	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
HORVU1Hr1G076800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU3Hr1G072970.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.03	Orthogroups_2024-Update
PSME_00040668-RA	No alias	(at5g02460 : 137.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.04	Orthogroups_2024-Update
Potri.007G038100	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s199_87V6	No alias	cycling dof factor 2	0.03	Orthogroups_2024-Update
Seita.1G290700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.4G124800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.003G301700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Solyc06g075370	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RMR9_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g076030	No alias	Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.03	Orthogroups_2024-Update
Sopen02g022790	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g023480	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Predicted GO
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Predicted GO
MF	GO:0003779	actin binding	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Predicted GO
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predicted GO
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004181	metallocarboxypeptidase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predicted GO
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006952	defense response	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
MF	GO:0008235	metalloexopeptidase activity	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0019829	cation-transporting ATPase activity	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
MF	GO:0036442	proton-exporting ATPase activity	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Predicted GO
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	Predicted GO
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	Predicted GO
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Predicted GO
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	60	115

External Links

No external refs found!

Brara.H01965.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation