Description : Pentatricopeptide repeat-containing protein At2g27610 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUW3]
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Arabidopsis release: At2g27610 | |
Cluster | HCCA clusters: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_23672 | No alias | pentatricopeptide repeat-containing protein, mitochondrial | 0.04 | Orthogroups_2024-Update | |
At1g06140 | No alias | Pentatricopeptide repeat-containing protein At1g06140,... | 0.03 | Orthogroups_2024-Update | |
At3g49170 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.04 | Orthogroups_2024-Update | |
Bradi3g41651 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.09G086600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G006200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.16G221300 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G058280.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
HORVU5Hr1G113330.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G011570.2 | No alias | RNA editing factor *(CRR22) | 0.03 | Orthogroups_2024-Update | |
PSME_00002137-RA | No alias | (at2g22070 : 559.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
Potri.016G075000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Solyc03g063690 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc04g082870 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc11g005970 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
Solyc11g067210 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc11g071370 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 361 | 407 |
IPR002885 | Pentatricopeptide_repeat | 457 | 505 |
IPR002885 | Pentatricopeptide_repeat | 559 | 606 |
IPR002885 | Pentatricopeptide_repeat | 157 | 200 |
IPR002885 | Pentatricopeptide_repeat | 636 | 658 |
IPR002885 | Pentatricopeptide_repeat | 60 | 88 |
IPR002885 | Pentatricopeptide_repeat | 233 | 254 |
IPR002885 | Pentatricopeptide_repeat | 432 | 453 |
IPR002885 | Pentatricopeptide_repeat | 261 | 287 |
IPR002885 | Pentatricopeptide_repeat | 534 | 555 |
IPR032867 | DYW_dom | 733 | 856 |
No external refs found! |