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  5. Brara.H02086.1

Brara.H02086.1


Description : calcium sensor *(CML)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02086.1
Cluster HCAA Clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Brara.H02431.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Brara.I00982.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Brara.I03055.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Glyma.02G245700 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
Glyma.11G056500 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Glyma.14G215800 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G029850.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
HORVU1Hr1G057410.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
PSME_00046736-RA No alias (at1g24620 : 146.0) EF hand calcium-binding protein... 0.02 Orthogroups_2024-Update
Potri.008G134300 No alias EF hand calcium-binding protein family 0.03 Orthogroups_2024-Update
Pp1s107_173V6 No alias polcalcin jun o 2 0.03 Orthogroups_2024-Update
Solyc03g118810 No alias Calcium binding protein (AHRD V3.3 *** Q93YA8_SESRO) 0.03 Orthogroups_2024-Update
Sopen01g037210 No alias EF hand 0.03 Orthogroups_2024-Update
Sopen01g050420 No alias EF hand 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0000492 box C/D snoRNP assembly IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 38 97
IPR002048 EF_hand_dom 110 172
No external refs found!