Brara.H02152.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02152.1
Cluster	HCAA Clusters: Cluster_207

Target	Alias	Description	ECC score	Gene Family Method
29563	No alias	OBF binding protein 4	0.02	Orthogroups_2024-Update
29617	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
A4A49_12086	No alias	cyclic dof factor 2	0.05	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.03	Orthogroups_2024-Update
A4A49_35213	No alias	dof zinc finger protein dof1.7	0.03	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
At1g26790	No alias	Dof-type zinc finger DNA-binding family protein...	0.03	Orthogroups_2024-Update
At1g29160	No alias	Uncharacterized protein At1g29160 (Fragment)...	0.03	Orthogroups_2024-Update
At1g69570	No alias	Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]	0.07	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At5g39660	No alias	Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]	0.07	Orthogroups_2024-Update
At5g60850	No alias	OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]	0.06	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.05	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Brara.A01411.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.C04204.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D00980.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
GRMZM2G327189	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.06G194800	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.09G237000	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G017290.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU2Hr1G095390.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.04	Orthogroups_2024-Update
LOC_Os06g17410	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
PSME_00040668-RA	No alias	(at5g02460 : 137.0) Dof-type zinc finger DNA-binding...	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Pp1s149_180V6	No alias	cycling dof factor 2	0.02	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.04	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G121400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.009G153400.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.06	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.07	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.06	Orthogroups_2024-Update
Sopen03g040210	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Predicted GO
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Predicted GO
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Predicted GO
BP	GO:0006595	polyamine metabolic process	IEP	Predicted GO
BP	GO:0006596	polyamine biosynthetic process	IEP	Predicted GO
BP	GO:0006597	spermine biosynthetic process	IEP	Predicted GO
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0008215	spermine metabolic process	IEP	Predicted GO
BP	GO:0008216	spermidine metabolic process	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
BP	GO:0008295	spermidine biosynthetic process	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016831	carboxy-lyase activity	IEP	Predicted GO
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Predicted GO
BP	GO:0017007	protein-bilin linkage	IEP	Predicted GO
BP	GO:0017009	protein-phycocyanobilin linkage	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predicted GO
BP	GO:0044106	cellular amine metabolic process	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0097164	ammonium ion metabolic process	IEP	Predicted GO
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	122	178

External Links

No external refs found!

Brara.H02152.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation