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  5. Brara.H02153.1

Brara.H02153.1


Description : Unknown function


Gene families : OG_42_0000920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000920_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02153.1
Cluster HCAA Clusters: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
At1g19930 No alias Putative F-box/kelch-repeat protein At1g19930... 0.03 Orthogroups_2024-Update
At4g11750 No alias Putative F-box/kelch-repeat protein At4g11750... 0.03 Orthogroups_2024-Update
At5g03010 No alias At5g03010 [Source:UniProtKB/TrEMBL;Acc:Q6NLS9] 0.04 Orthogroups_2024-Update
At5g51250 No alias F-box/kelch-repeat protein At5g51250... 0.04 Orthogroups_2024-Update
Brara.A00055.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01852.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02767.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K00892.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 61
IPR006652 Kelch_1 164 197
No external refs found!