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  5. Brara.H02156.1

Brara.H02156.1


Description : GARP subgroup PHL transcription factor


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02156.1
Cluster HCAA Clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
A4A49_09886 No alias putative transcription factor kan2 0.03 Orthogroups_2024-Update
Bradi1g07511 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B00662.1 No alias KANADI-type transcription factor 0.04 Orthogroups_2024-Update
Brara.J01875.1 No alias KANADI-type transcription factor 0.05 Orthogroups_2024-Update
GRMZM2G035370 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
GRMZM2G370425 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G374986 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G246200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G146600 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G017240.8 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
HORVU5Hr1G097900.21 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g56990 No alias Myb-like DNA-binding domain containing protein,... 0.04 Orthogroups_2024-Update
LOC_Os06g40710 No alias Myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os06g45890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g01480 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
MA_10432937g0010 No alias (at5g16560 : 130.0) Encodes a KANADI protein (KAN) that... 0.04 Orthogroups_2024-Update
MA_21538g0020 No alias (at3g04030 : 219.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00031433-RA No alias (at4g28610 : 112.0) Similar to phosphate starvation... 0.03 Orthogroups_2024-Update
Potri.016G121800 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Pp1s269_36V6 No alias myb-cc type transfactor 0.03 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.03 Orthogroups_2024-Update
Solyc04g050070 No alias Myb-like transcription factor family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc10g083340 No alias Myb family transcription factor APL (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc11g011770 No alias Myb family transcription factor-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g067280 No alias MYB-CC type transfactor 0.05 Orthogroups_2024-Update
Sopen08g024650 No alias MYB-CC type transfactor, LHEQLE motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 126 173
No external refs found!