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  5. Brara.H02157.1

Brara.H02157.1


Description : E3 ubiquitin ligase *(SNIPER)


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02157.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
At3g19950 No alias RING/U-box superfamily protein... 0.04 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Bradi3g38870 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.C03763.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G122848 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G157855 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Glyma.09G165200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G271200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G244900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G051760.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G043120.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g09820 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g04660 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_77269g0010 No alias (at3g46620 : 139.0) zinc finger (C3HC4-type RING finger)... 0.04 Orthogroups_2024-Update
PSME_00026521-RA No alias (at3g19950 : 152.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00056956-RA No alias (at2g40830 : 186.0) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
Potri.006G032100 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Potri.010G168300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G029300 No alias RING-H2 finger C1A 0.02 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G031500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.8G163900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G386000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g009000 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT3G56580.3) 0.03 Orthogroups_2024-Update
Sopen02g015860 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.contig_2210.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_2287.2 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
evm.model.contig_3394.2 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 109 151
No external refs found!