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  5. Brara.H02197.1

Brara.H02197.1


Description : regulatory protein *(CORD) of cortical microtubule organisation


Gene families : OG_42_0007760 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007760_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02197.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
At1g23790 No alias At1g23790 [Source:UniProtKB/TrEMBL;Acc:Q9ZUB7] 0.07 Orthogroups_2024-Update
Glyma.01G031300 No alias Plant protein of unknown function (DUF936) 0.1 Orthogroups_2024-Update
Glyma.02G034500 No alias Plant protein of unknown function (DUF936) 0.09 Orthogroups_2024-Update
MA_134781g0010 No alias (at1g23790 : 254.0) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00038806-RA No alias (at1g23790 : 238.0) Plant protein of unknown function... 0.01 Orthogroups_2024-Update
Potri.008G192300 No alias Plant protein of unknown function (DUF936) 0.05 Orthogroups_2024-Update
Solyc05g005580 No alias DUF936 family protein (AHRD V3.3 *** G7K1E3_MEDTR) 0.16 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 117
IPR010341 DUF936_pln 420 519
IPR010341 DUF936_pln 239 400
No external refs found!