Description : transcription factor *(CRF) & subgroup ERF-VI transcription factor
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.H02229.1 | |
Cluster | HCAA Clusters: Cluster_349 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_24642 | No alias | ethylene-responsive transcription factor rap2-11 | 0.02 | Orthogroups_2024-Update | |
A4A49_35180 | No alias | ethylene-responsive transcription factor 1b | 0.02 | Orthogroups_2024-Update | |
A4A49_42088 | No alias | ethylene-responsive transcription factor 13 | 0.02 | Orthogroups_2024-Update | |
A4A49_42290 | No alias | ethylene-responsive transcription factor rap2-4 | 0.02 | Orthogroups_2024-Update | |
At4g25480 | No alias | Dehydration-responsive element-binding protein 1A... | 0.04 | Orthogroups_2024-Update | |
At5g25190 | No alias | Ethylene-responsive transcription factor ERF003... | 0.03 | Orthogroups_2024-Update | |
Glyma.07G156200 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.20G115300 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G088790.1 | No alias | subgroup ERF-III transcription factor | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g11460 | No alias | AP2 domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
MA_100577g0010 | No alias | (at5g21960 : 112.0) encodes a member of the DREB... | 0.02 | Orthogroups_2024-Update | |
PSME_00005183-RA | No alias | (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... | 0.04 | Orthogroups_2024-Update | |
PSME_00046052-RA | No alias | (at1g19210 : 89.0) encodes a member of the DREB... | 0.04 | Orthogroups_2024-Update | |
Potri.002G085600 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.006G054500 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
Pp1s127_75V6 | No alias | ap2 erf domain-containing transcription factor | 0.04 | Orthogroups_2024-Update | |
Pp1s133_11V6 | No alias | c-repeat binding factor 4 | 0.04 | Orthogroups_2024-Update | |
Pp1s21_239V6 | No alias | ap2 erf domain-containing transcription factor | 0.04 | Orthogroups_2024-Update | |
Seita.1G187800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.4G051200.1 | No alias | subgroup ERF-V transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.6G181700.1 | No alias | subgroup ERF-X transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.8G012200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Seita.9G268700.1 | No alias | subgroup ERF-I transcription factor | 0.03 | Orthogroups_2024-Update | |
Seita.9G516800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.007G124100.1 | No alias | subgroup ERF-I transcription factor | 0.04 | Orthogroups_2024-Update | |
Sobic.007G188701.1 | No alias | subgroup ERF-X transcription factor | 0.04 | Orthogroups_2024-Update | |
Solyc12g049560 | No alias | Ethylene-responsive transcription factor (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
Sopen02g037700 | No alias | AP2 domain | 0.03 | Orthogroups_2024-Update | |
Sopen04g006170 | No alias | AP2 domain | 0.03 | Orthogroups_2024-Update | |
Sopen04g027740 | No alias | AP2 domain | 0.03 | Orthogroups_2024-Update | |
Sopen05g030600 | No alias | AP2 domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0043543 | protein acylation | IEP | Predicted GO |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 80 | 133 |
No external refs found! |