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  5. Brara.H02248.1

Brara.H02248.1


Description : substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0000982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02248.1
Cluster HCAA Clusters: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
Bradi2g21750 No alias F-box family protein 0.02 Orthogroups_2024-Update
GRMZM2G044512 No alias F-box family protein 0.02 Orthogroups_2024-Update
Potri.009G047600 No alias F-box family protein 0.03 Orthogroups_2024-Update
Sobic.003G309900.1 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!