1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H02328.1

Brara.H02328.1


Description : OPC-8


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02328.1
Cluster HCAA Clusters: Cluster_397

Target Alias Description ECC score Gene Family Method Actions
At1g62940 No alias 4-coumarate--CoA ligase-like 1... 0.04 Orthogroups_2024-Update
Brara.F01460.1 No alias OPC-8 0.04 Orthogroups_2024-Update
Brara.H02327.1 No alias OPC-8 0.04 Orthogroups_2024-Update
Glyma.11G010500 No alias 4-coumarate:CoA ligase 3 0.04 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
MA_10426784g0020 No alias (at4g05160 : 437.0) Encodes a peroxisomal protein... 0.03 Orthogroups_2024-Update
PSME_00008139-RA No alias (p31685|4cl2_soltu : 666.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
Pp1s20_346V6 No alias 4-coumarate: ligase 0.03 Orthogroups_2024-Update
Solyc02g088710 No alias 4-coumarate:CoA ligase-like (AHRD V3.3 *** Q84K86_NICSY) 0.02 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008285 negative regulation of cell proliferation IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0042127 regulation of cell proliferation IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 464 539
IPR000873 AMP-dep_Synth/Lig 53 455
No external refs found!