Brara.H02380.1

Description : subgroup ERF-II transcription factor *(ERF16/17/18)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02380.1
Cluster	HCAA Clusters: Cluster_349

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16120	No alias	ethylene-responsive transcription factor erf061	0.03	Orthogroups_2024-Update
A4A49_17425	No alias	dehydration-responsive element-binding protein 2a	0.03	Orthogroups_2024-Update
A4A49_18156	No alias	ethylene-responsive transcription factor shine 3	0.03	Orthogroups_2024-Update
At1g44830	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Orthogroups_2024-Update
At3g20310	No alias	Ethylene-responsive transcription factor 7...	0.03	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.07	Orthogroups_2024-Update
Brara.B00253.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.B01460.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.G01019.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.G02224.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.04	Orthogroups_2024-Update
Glyma.04G238700	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Glyma.05G092800	No alias	cooperatively regulated by ethylene and jasmonate 1	0.06	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.11G053600	No alias	DREB and EAR motif protein 2	0.04	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.14G146100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.16G164800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G098330.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G111550.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
LOC_Os03g64260	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g22770	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_8384767g0010	No alias	(at1g33760 : 124.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00007051-RA	No alias	(at1g74930 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00057236-RA	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G079900	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Potri.003G150800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G138100	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.011G057000	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.012G134000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.013G056700	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.014G094500	No alias	cytokinin response factor 5	0.04	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s2_404V6	No alias	erf2 transcription factor	0.05	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.2G364700.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Seita.4G060700.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.05	Orthogroups_2024-Update
Sobic.008G145000.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.010G089700.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Solyc03g006320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.03	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.04	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc08g078180	No alias	Ethylene Response Factor A.1	0.04	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc10g076380	No alias	Dehydration responsive element binding transcription...	0.02	Orthogroups_2024-Update
Sopen01g050460	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen06g016040	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen07g027720	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Predicted GO
CC	GO:0005737	cytoplasm	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
MF	GO:0008170	N-methyltransferase activity	IEP	Predicted GO
MF	GO:0008276	protein methyltransferase activity	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predicted GO
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predicted GO
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
MF	GO:0042054	histone methyltransferase activity	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	8	58

External Links

No external refs found!

Brara.H02380.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation