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  5. Brara.H02401.1

Brara.H02401.1


Description : zf-HD-type transcription factor


Gene families : OG_42_0000122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000122_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02401.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32580 No alias homeobox protein 22 0.03 Orthogroups_2024-Update
Brara.B03117.1 No alias zf-HD-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G02896.1 No alias zf-HD-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.17G100000 No alias mini zinc finger 0.04 Orthogroups_2024-Update
Kfl00144_0110 kfl00144_0110_v1.1 no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00002749-RA No alias (at2g02540 : 197.0) Zinc finger homeobox protein.... 0.03 Orthogroups_2024-Update
Potri.003G000400 No alias homeobox protein 31 0.03 Orthogroups_2024-Update
Potri.013G108900 No alias homeobox protein 33 0.03 Orthogroups_2024-Update
Sopen04g006370 No alias ZF-HD protein dimerisation region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 23 76
No external refs found!