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  5. Brara.H02446.1

Brara.H02446.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02446.1
Cluster HCAA Clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
A4A49_31875 No alias homeobox-leucine zipper protein meristem l1 0.03 Orthogroups_2024-Update
GRMZM2G123140 No alias homeobox-7 0.03 Orthogroups_2024-Update
LOC_Os01g57890 No alias Homeobox domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.002G154700 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Potri.017G144601 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s209_10V6 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 7 58
IPR002913 START_lipid-bd_dom 192 413
No external refs found!