1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.H02469.1

Brara.H02469.1


Description : 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.H02469.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
439120 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
A4A49_22832 No alias putative linoleate 9s-lipoxygenase 5 0.02 Orthogroups_2024-Update
At3g22400 No alias Linoleate 9S-lipoxygenase 5... 0.03 Orthogroups_2024-Update
Bradi1g09260 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Brara.B01730.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Glyma.08G189400 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.11G130200 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Glyma.16G008700 No alias lipoxygenase 3 0.03 Orthogroups_2024-Update
HORVU5Hr1G117110.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
LOC_Os02g10120 No alias lipoxygenase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g04420 No alias lipoxygenase 4, putative 0.03 Orthogroups_2024-Update
PSME_00020895-RA No alias (p37831|lox1_soltu : 805.0) Lipoxygenase 1 (EC... 0.02 Orthogroups_2024-Update
Pp1s70_182V6 No alias lipoxygenase 0.03 Orthogroups_2024-Update
Sobic.001G125700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Solyc01g006560 No alias Lipoxygenase (AHRD V3.3 *** C0KKU8_SOLLC) 0.03 Orthogroups_2024-Update
Solyc05g014790 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV84_SOLCH) 0.02 Orthogroups_2024-Update
Sopen03g041110 No alias Lipoxygenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA 16Dec
MF GO:0046872 metal ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 139 221
IPR013819 LipOase_C 234 902
No external refs found!