Brara.H02643.1

Description : E3 ubiquitin ligase *(RIE1)

Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02643.1
Cluster	HCAA Clusters: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
Brara.F03459.1	No alias	E3 ubiquitin ligase *(RIE1)	0.03	Orthogroups_2024-Update
Brara.I01217.1	No alias	E3 ubiquitin ligase *(RIE1)	0.03	Orthogroups_2024-Update
Brara.I04212.1	No alias	E3 ubiquitin ligase *(RIE1)	0.04	Orthogroups_2024-Update
GRMZM2G089466	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Glyma.04G071800	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
LOC_Os07g27950	No alias	RING zinc finger protein, putative, expressed	0.02	Orthogroups_2024-Update
Potri.002G155200	No alias	RING/U-box superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G106300	No alias	Zinc finger, C3HC4 type (RING finger) family protein	0.03	Orthogroups_2024-Update
Solyc05g051040	No alias	RING/U-box superfamily protein (AHRD V3.3 *** AT3G61180.1)	0.03	Orthogroups_2024-Update
evm.model.tig00020629.137	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	333	375

External Links

No external refs found!