Brara.H02645.1

Description : subgroup ERF-III transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.H02645.1
Cluster	HCAA Clusters: Cluster_177

Target	Alias	Description	ECC score	Gene Family Method
A4A49_16905	No alias	ethylene-responsive transcription factor 5	0.04	Orthogroups_2024-Update
At1g33760	No alias	Ethylene-responsive transcription factor ERF022...	0.04	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.04	Orthogroups_2024-Update
At3g23220	No alias	Ethylene-responsive transcription factor ERF095...	0.04	Orthogroups_2024-Update
At5g11590	No alias	Dehydration-responsive element-binding protein 3...	0.03	Orthogroups_2024-Update
At5g67000	No alias	Ethylene-responsive transcription factor ERF122...	0.03	Orthogroups_2024-Update
Bradi3g08790	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g16450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.A03436.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.J00757.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.J02216.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G171179	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
GRMZM2G438202	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.14G205600	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
HORVU1Hr1G058940.3	No alias	transcription factor component *(HRE/RAP2.12) of...	0.02	Orthogroups_2024-Update
HORVU2Hr1G077180.2	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
HORVU2Hr1G103660.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU5Hr1G080420.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU6Hr1G080340.11	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43820	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09810	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_10436654g0010	No alias	(at1g74930 : 110.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_203191g0010	No alias	(at1g28360 : 85.9) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_33394g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_8552524g0010	No alias	(q9lw50\|erf2_nicsy : 135.0) Ethylene-responsive...	0.04	Orthogroups_2024-Update
MA_922309g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00004941-RA	No alias	(at4g17500 : 94.7) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00022946-RA	No alias	(at5g61890 : 105.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00026873-RA	No alias	(at5g11590 : 114.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00056166-RA	No alias	(at5g11590 : 103.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G079800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G141200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.006G069400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.007G138100	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Potri.008G120100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G072600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Seita.1G055900.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.1G332600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.3G291500.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.003G028000.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.003G442100.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G063900.1	No alias	subgroup ERF-V transcription factor	0.02	Orthogroups_2024-Update
Solyc01g095500	No alias	Sl Cytokinin Response Factor 5	0.03	Orthogroups_2024-Update
Solyc05g050830	No alias	Ethylene-responsive transcription factor4	0.04	Orthogroups_2024-Update
Solyc05g052410	No alias	Dehydration responsive element binding protein (AHRD...	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Solyc08g078410	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc12g056590	No alias	Ethylene Response Factor D.2	0.03	Orthogroups_2024-Update
Sopen08g020590	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predicted GO
MF	GO:0008171	O-methyltransferase activity	IEP	Predicted GO
BP	GO:0043248	proteasome assembly	IEP	Predicted GO
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predicted GO
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	13	62

External Links

No external refs found!

Brara.H02645.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation